Choosing the right software for use in a research software project can be challenging. How do we know which software is both fit for purpose and provides a sound basis for our project for the foreseeable future? And, how do we make such a choice given that the time and effort to explore what could be myriad alternatives may be limited?
By Mike Jackson, EPCC
This blog post was originally published on the EPCC blog.
By Mike Jackson, Software Architect and Kostas Kavoussanakis, Group Manager, EPCC, The University of Edinburgh; Edward Wallace, Sir Henry Dale Fellow, School of Biological Sciences, The University of Edinburgh
A multi-disciplinary team of biologists, bioinformaticians and research software engineers based at EPCC and The Wallace Lab at University of Edinburgh, The Shah Lab at Rutgers University and The Lareau Lab at University of California, Berkeley will enhance and extend a software suite, called RiboViz to extract biological insight from "ribosome profiling" data and drive forward…
By Mike Jackson, Research Software Engineer. When developing research software, we need to know what we are going to write, who it is for (even if this is just us), how we will get it to them, how it will help them, and how we will evaluate whether it has helped them. A Software Management Plan (SMP) can help us think about these and decide upon the processes we will use when developing our software. To help write SMPs, we have now published version 1.0 of our Checklist for a Software Management Plan.
By Mike Jackson, Software Architect, The Software Sustainability Institute.
PickCells is an image analysis platform developed by the Centre for Regenerative Medicine (CRM) at The University of Edinburgh.
By Mike Jackson, Software Architect.
The Software Sustainability Institute has published a set of guides about depositing research software into digital repositories. These guides cover the main aspects of software deposit.
By Mike Jackson, Software Architect. On the 11th July, the Software Sustainability Institute and Jisc ran a Software Deposit and Preservation Workshop at St. Anne’s College, Oxford. This workshop brought together 12 research data managers, digital repository vendors, publishers, policymakers and researchers.
By Mike Jackson, Software Architect, The Software Sustainability Institute
On the 7th March, Jisc and the Software Sustainability Institute ran a Software Deposit and Preservation Policy and Planning Workshop at Jisc’s Brettenham House in London. This was part of an activity, funded by Jisc, to provide software deposit and preservation guidance, in particular to develop use cases and workflows for software deposit via Jisc's Research Data Shared Service (RDSS). A draft report on the workshop is now available.